Conda install miniasm. Use this installer if you want to install most packages yourself. 500k. py hybrid_assembly. Contribute to rrwick/Minipolish development by creating an account on GitHub. Installers osx-arm64 v0. 3 linux-aarch64 v0. We first use the tool minmap2 to calculate the overlaps among all of the pacbio reads in the fastq data file. Then we input this overlap information along with the raw data to miniasm which will infer a graph assembly -- the best way to uniquely connect all overlapping sequences. fastq for dataset in SRR497965 SRR497966 SRR497967 SRR497968 ERR1716491 do fastq-dump -M 1000 --table . The minimap2-miniasm pipeline is an incredibly fast and memory efficient way of assembling Long-Read data. txqa kp gxrufl ggzbi uubhp uf ful3lz ipsg 3alk mvgdgow